| Protein: | kap-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 696 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kap-1.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..1] | [696..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MNQVSIDAHP SDQAIIVRFE QSPTNVESLG HQKIIHLKEM SLDVDIRALS NVILQKCLFI 60
61 PATSRSQLEQ VLFYIQKRGN QRISARSRSS SAVSFDRRPI
|
| Detection Method: |  |
| Confidence: | 54.39794 |
| Match: | 2c1tA |
| Description: | Structure of the Kap60p:Nup2 complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [101-696] |
1 11 21 31 41 51
| | | | | |
1 HSPTISAELG KIDEYIECFY GETSVEKNKG AVALYELSKN PQNLTQLVNN ETLMMALARV 60
61 FREDWKKHFE VGTNIMNLFV NISKFSCLHG ILLHHKIGTL CVNAMEHETK RYDFWIAEMK 120
121 KTDQETLRKL KTAIRKQAML LAACVTFLTN LATDISVELK MVRRNLVALL VKCLQMSSES 180
181 TSSLTTATIK FLLKLSIFDE NKIVMEQNGT IEKLLKLFPI QDPELRKAVI MLLFNFSFDS 240
241 KNLPKMVNGG LVPHMASLLD SDTKALNMMY LLSCNDDAKA MLAYTDAIKL LMKDVLSGTG 300
301 SEVTKAVLLN ICLEKRNAQL VCGQRGQGLD LLMEMSINSR DLMLIKVVRA ISSHEGATQN 360
361 MFLKWIETLI GIAKNEGADN SESKSSFGLE CMGTVAELKV APWAKIIQSE NLVPWMKTQL 420
421 QEGIDESEEV TVLRDIKPLQ LQIVIACGTM ARQLDAARLL APLIDTFVQL LQSCQIDDEF 480
481 VVQLLYVFLQ FLKHKELSAR LMTQDSALGA HMIDLMHDAN AVVREVCDNA LLIMGEHSKE 540
541 WAKRIAGERF KWHNAQWLEM VERDDSEFVD YDDEDFGADL KFDHYDDGFD MNEPLF
|
| Detection Method: | |
| Confidence: | 62.0 |
| Match: | 1t08A |
| Description: | Crystal structure of beta-catenin/ICAT helical domain/unphosphorylated APC R3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 3.05338750264476 | bayes_pls_golite062009 |
| protein binding | 2.78733902345842 | bayes_pls_golite062009 |
| binding | 2.6374633159018 | bayes_pls_golite062009 |
| transporter activity | 1.55621630624352 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.33334123659384 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.23804310697631 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.15447282085461 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.698613639309592 | bayes_pls_golite062009 |
| nucleic acid binding | 0.425403776087115 | bayes_pls_golite062009 |
| actin binding | 0.360199499297314 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.350388174853674 | bayes_pls_golite062009 |
| signal sequence binding | 0.27824906981293 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.237512539263598 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.141331164449492 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.0332743336452223 | bayes_pls_golite062009 |
| RNA binding | 0.0287526191298597 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.0268373969988844 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.00234756529236324 | bayes_pls_golite062009 |
