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View Structure Prediction Details

Protein: CE29956
Organism: Caenorhabditis elegans
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29956.

Description E-value Query
Range
Subject
Range
gi|76619208 - gi|76619208|ref|XP_602903.2| PREDICTED: similar to apolipoprotein L, 3 (predicted) [Bos taurus]
310.0 [0..3] [261..243]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIYESLKST LMNGEEMPKE LQVKAWGAQW HLDRWSSNRQ EIMNRMEEIA KDLDGLEKAS  60
   61 AIATTVGSSV DIASGLAVFG GLFFMPPVAI AGLIVGAASG VSNVATGVNK KLATDHKIRE 120
  121 INRMLAEDAK FFEELLH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRNDLLNEVR RFVEDKQSSK IFKNFDDVQS HLKTLFGVSL AGITGFGIKM AASSMGHLTN  60
   61 ALMKGMLQSV AAIGIVLDGV TLAMSANTLK NGSSSELAGK IREASGKMER MRHNVVTNFL 120
  121 NYDAWNSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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