| Protein: | lpd-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 318 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lpd-2.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..1] | [294..6] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MTETEQEAFA DLVAELETQT AEAVKAFSKV FDRMEETNDD KEGLSLLKLK NYEMTAYLGE 60
61 LTVLMSKMMK GESITVEPSV KRALKHRVFI EKMKPVEDKM KPQIEKLLGR SSAESGASNG 120
121 SSKGNHRVRL DNMDVEGDEE EEEEDEDDEE GKGAKEVKKY VAPRIRAVRY
|
| Detection Method: |  |
| Confidence: | 15.468521 |
| Match: | PF04000.6 |
| Description: | No description for PF04000.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [171-318] |
1 11 21 31 41 51
| | | | | |
1 EEEDEAPNKQ QEKAKRRAMQ SSLIMELKNQ YSDAPEEIRE MSEKKYQYDR ERERYEEDNF 60
61 TRIRLNKDQK RRSEQLGRSE TLDDLLSFGD YMMRGEDGRA LSEGNKRKRA TSSGAGGDTK 120
121 RHKKSQKERK KAAKGKKEGR KRAIRRRQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
