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View Structure Prediction Details

Protein: pry-1
Organism: Caenorhabditis elegans
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pry-1.

Description E-value Query
Range
Subject
Range
gi|6653584 - gi|6653584|gb|AAF22799.1|AF205888_1 AXIN2 [Homo sapiens]
310.0 [0..4] [585..74]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METHLGWARS LEAVLSDRSA LDAFQEWLIE YSSPQYLDLF FAIRAYERMA LEGKPEKSQL  60
   61 SKSIYSKFLS SRTGNCEAIP KHFRAPIGEK LRHGTELEDR VFSHCSNFVQ EFLRRQHEEF 120
  121 VGSEEFIEAF NKMSSTTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 2jm5A
Description: No description for 2jm5A was found.

Predicted Domain #2
Region A:
Residues: [139-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQLPGGSAHH SSHQNTMRRS SGTTSRKSAA QIATQLTAEA LLKSKHDRHS KLGETKLEKM  60
   61 YPPTRQPYVC NATTSHNDSA VSSTFSGDTP EAHRMHSNRL RHIRDEQARE NHGTMTLPRV 120
  121 EKASVDGQQW DHSSESGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNFAMEITRK LLRHIDKVKL NDEMEKRIDD IEECRYTTID MVNGTEPNDD LGKIDEDEEL  60
   61 DDYLKMKMTD DSQKGSTNRS PKGPAGEPNK SGEGSKNTTL SPTNRAPAQL HNTIRVPRRK 120
  121 DYPRDTSASL KSHRHHQIDT NRMMSQSMCA PSYSSASSSY SRDSFAPAPT TRVNFAPGSS 180
  181 KSSQFYDSSG IGSMAPSAFS ATSSLDYKDR RQHRKAPTPK KHSKIGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [504-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLSNLITISY LGTDKIPVVT HVPNDGPMTL AEFKRHFALP NGAHQLFFKT ECEDGSAPFQ  60
   61 LLLIKDEHHL LPVFEGRIAA ELR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1wspA
Description: Crystal structure of axin dix domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle