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View Structure Prediction Details

Protein: CE30625
Organism: Caenorhabditis elegans
Length: 102 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30625.

Description E-value Query
Range
Subject
Range
gi|159130492 - gi|159130492|gb|EDP55605.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
gi|70990326, gi|... - gi|70990326|ref|XP_750012.1| conserved hypothetical protein [Aspergillus fumigatus Af293], gi|668476...
124.0 [0..12] [98..74]
gi|76639958 - gi|76639958|ref|XP_870510.1| PREDICTED: similar to UPF0287 protein DC13 [Bos taurus]
122.0 [0..1] [74..230]
gi|50795800 - gi|50795800|ref|XP_423810.1| PREDICTED: similar to RIKEN cDNA 1110046L09 [Gallus gallus]
120.0 [0..1] [75..176]
gi|114663888 - gi|114663888|ref|XP_511125.2| PREDICTED: similar to DC13 [Pan troglodytes]
105.0 [0..1] [51..313]
gi|123979754, gi... - gi|123994527|gb|ABM84865.1| chromosome 16 open reading frame 61 [synthetic construct], gi|123979754|...
C16orf61 - chromosome 16 open reading frame 61
102.0 [0..1] [75..1]
COXM2_MOUSE - COX assembly mitochondrial protein 2 homolog OS=Mus musculus GN=Cmc2 PE=3 SV=1
100.0 [0..1] [73..1]
gi|114193576, gi... - gi|115396736|ref|XP_001214007.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
97.0 [0..1] [88..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPDLSPHLH TKECNMLIEF LQRCHSEKPI GKMIGKCSYW DEAVWQCTKK ERIWRRDNNP  60
   61 AYKRRIVELR SLPEKYWTPA LHKLKEDGVL IGGADQSQGC KI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 37.229148
Match: PF08583.1
Description: No description for PF08583.1 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.552 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.515 N/A N/A a.4.1 Homeodomain-like
View Download 0.452 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.449 N/A N/A d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.449 N/A N/A d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.443 N/A N/A a.60.9 lambda integrase-like, N-terminal domain
View Download 0.427 N/A N/A a.1.1 Globin-like
View Download 0.427 N/A N/A a.1.1 Globin-like
View Download 0.392 N/A N/A a.74.1 Cyclin-like
View Download 0.382 N/A N/A c.55.1 Actin-like ATPase domain
View Download 0.365 N/A N/A a.74.1 Cyclin-like
View Download 0.352 N/A N/A a.7.8 GAT domain
View Download 0.284 N/A N/A d.118.1 N-acetylmuramoyl-L-alanine amidase-like
View Download 0.268 N/A N/A d.150.1 4'-phosphopantetheinyl transferase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle