| Protein: | CE29676 |
| Organism: | Caenorhabditis elegans |
| Length: | 516 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29676.
| Description | E-value | Query Range |
Subject Range |
|
|
518.0 | [0..1] | [516..100] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MFKKPFTVKK NTNQRNSDSR KLFNRLKEEV NGESNIDKKG QVAQVKLTTF EGTQMNVYTI 60
61 DKVPMLFEFS ENGNIYPTVY YMWNNQKTFP VLICHEPVFS YLENGADLML PGVIRSSIFP 120
121 FPTFRKGAPV AIAFYSSETE TVSGPSAVGC SMMSSEEMVV CGFKGKGVQV LHVFRDQLWD 180
181 FGPKGVPP
|
| Detection Method: |  |
| Confidence: | 36.154902 |
| Match: | 2apoA |
| Description: | Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.517703752865009 | bayes_pls_golite062009 |
|
Region A: Residues: [189-278] |
1 11 21 31 41 51
| | | | | |
1 SCSLEDWNKI GVESEESEED EETDERKELD ACQSTLPKEE EKQEVIQEEP MENLLTRCFL 60
61 AGLKHRFTRN QLPMDVGQFY TQCVLSCVPD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [279-410] |
1 11 21 31 41 51
| | | | | |
1 GRRLDMKKTH FKKFATFLQE INELEITDER IVDEAPAEKA KFDAPVIAEY FAITEPTLKL 60
61 FPGCSKGDLL TVKQIKEFVT KYVNENKLAA GGSVRLDPII FSVTKIQTDT TPWANLMKEI 120
121 HSRMTATWHI RW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [411-516] |
1 11 21 31 41 51
| | | | | |
1 PDGREIVRKV SPPRVEFKIE NRAGNKKVTL LNGLAMFGID IRTICHQIQT GVATSVTSQW 60
61 EVPGVEGPQV LVQGNQIHFI ADLLIKSYGI DKKFMKGTEL AVKKKK
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 2if1A |
| Description: | HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 5.23106085535113 | bayes_pls_golite062009 |
| translation regulator activity | 1.57171521305666 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.56505742236312 | bayes_pls_golite062009 |
| nucleic acid binding | 0.73754867508365 | bayes_pls_golite062009 |
| binding | 0.496035645574177 | bayes_pls_golite062009 |
