| Protein: | gar-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 713 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MPNYTVPPDP ADTSWDSPYS IPVQIVVWII IIVLSLETII GNAMVVMAYR IERNISKQVS 60
61 NRYIVSLAIS DLIIGIEGFP FFTVYVLNGD RWPLGWVACQ TWLFLDYTLC LVSILTVLLI 120
121 TADRYLSVCH TAKYLKWQSP TKTQLLIVMS WLLPAIIFGI MIYGWQAMTG QSTSMSGAEC 180
181 SAPFLSNPYV NMGMYVAYYW TTLVAMLILY KGIHQAAKNL EKKAKAKERR HIALILSQRL 240
241 GTQVGVSLML QSKAEKEKAE EAQKDSGYTS NQAGDANNLR RFGFSEPETS QFRVDPNSNN 300
301 NLNVEGSLNT ENDQNLGVIE EERSGFLSRR ESNESYYPGP HPTAANSRRC SEMEKVSLLS 360
361 ESDGV
|
| Detection Method: |  |
| Confidence: | 6.04 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [366-549] |
1 11 21 31 41 51
| | | | | |
1 PSTRPAKSYG RLSLRSRYSA SESITTTHEN DEKEVEKADS LQKLFADDEL GSVLNFKEEK 60
61 LKNTDSNNDS DTTSVILQRS RKYKKNKRPR SSRRSEHSTP RQIAKVKQAE GTAAQLIEES 120
121 VPDDDQTETI EVKRTDRWVV SMKKRIARAL IRRRSTTRPE RGSSSNSDDS SSEVEGEEKP 180
181 EVRN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [550-713] |
1 11 21 31 41 51
| | | | | |
1 NGLKIPQLTV NNENRGETSS QPGRDRLAPP NKTDTFLSAS GVSRKISTIS TVITREKVIS 60
61 SIFAPIAVFN RGRKQTKAEK RAHKAFRTIT FIVGFFAILW SPYYIMATVY GFCKGECIPS 120
121 FLYTLSYYMC YLNSSGNPFA YALANRQFRS AFMRMFRGNF NKVA
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| Detection Method: | |
| Confidence: | 39.522879 |
| Match: | 2j4yA |
| Description: | No description for 2j4yA was found. |
