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View Structure Prediction Details

Protein: CE30481
Organism: Caenorhabditis elegans
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30481.

Description E-value Query
Range
Subject
Range
gi|157775355 - gi|157775355|ref|XP_001665743.1| hypothetical protein CBG18111 [Caenorhabditis briggsae AF16]
gi|39591661, gi|... - gi|39591661|emb|CAE71238.1| Hypothetical protein CBG18111 [Caenorhabditis briggsae], gi|187025156|em...
563.0 [0..1] [396..1]

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Predicted Domain #1
Region A:
Residues: [1-58]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWWFGGNPSP SDYPNAAIPN FNMHAFVIFS VFLIPLIAYI LILPGVRRKR VVTTVTYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [59-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMLAVGGALI ASLIYPCWAS GSQMIYTQFR GHSNERILAK IGVEIGLQKV NVTLKFERLL  60
   61 SSNDVLPGSD MTELYYNEGF DISGISSMAE ALHHGLENGL PYPMLSVLEY FSLNQDSFDW 120
  121 GRHYRVAGHY THAAIWFAFA CWCLSVVLML FLPHNAYKSI LATGISCLIA CLVYLLLSPC 180
  181 ELRIAFTGEN FERVDLTATF SFCFYLIFAI GILCVLCGLG LGICEHWRIY TLSTFLDASL 240
  241 DEHVGPKWKK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPTGGPALQG VQIGAYGTNT TNSSRDKNDI SSDKTAGSSG FQSRTSTCQS SASSASLRSQ  60
   61 SSIETVHDEA ELERTHVHFL QEPCSSSST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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