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View Structure Prediction Details

Protein: icl-1
Organism: Caenorhabditis elegans
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for icl-1.

Description E-value Query
Range
Subject
Range
gi|50776206 - gi|50776206|ref|XP_423253.1| PREDICTED: similar to swelling-induced chloride conductance regulatory ...
203.0 [0..3] [214..114]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTEVSQPT EGIKLATTNV QAFFKIDSLG NGTLYITDSA VIWISSAAGT KGFSVAYPAI  60
   61 VLHAISTDVS VFPSEHIFVM VDQRKSVRRR RRAPVLRTIQ EDDEQRGLEL AAAELEDEES 120
  121 DDDEEEPALE IRFVPDDKDS LSQIYHQIAV GQEENPEEDD PMYDDEEEEM EEEMGDDGQG 180
  181 QSGQWFTADN IDHMQMSEEG LANMQRIFGR GDQHQHHHNE DESME

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.154902
Match: 1zyiA
Description: Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle