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View Structure Prediction Details

Protein: CE30586
Organism: Caenorhabditis elegans
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30586.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
299.0 [0..1] [450..97]

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Predicted Domain #1
Region A:
Residues: [1-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSDKLSAD DVLNTLDKSN RHILTCILVC GLAWSPLAFT GLCPSFVVKA SENSSFIGVA  60
   61 DEFDLTGDAS WLAESTTTFY MVGNMIGGMF IPPLADHYGR LPVFVATVLL MAVGGMISAF 120
  121 STSIMMFCIM RMIHGIFYTA AGLAGWVLGY ENTPLRLRFF TSVYFGVMWV VGACFLGLLA 180
  181 YILPDWRYLM FCISVPNIFV ALLIYMTVPE SLHFLVSSQQ NEKIEAWLEK IRGPKGDISA 240
  241 SDIVEDRDEN GSSFKTLCRE MWKHKMFIVY VLVMTYIWIV DTFIYFGLAF YSTNLAGNLY 300
  301 LNFVLMSLVE APAYIFSPIF MNKYGRKVLI SGTHIIAGLS FLGIVLSSEA WHIHFWLLGK 360
  361 FAISCSFMSI YMFASEIFPT DGRNKCIGFC ETLSRFGGML SPYLSHLTAV HALAPAITLS 420
  421 LIAVSGGLLT LILPETLNTK LPSTIAETAS RRQLIDDKSD SSSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle