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View Structure Prediction Details

Protein: CE29529
Organism: Caenorhabditis elegans
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29529.

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
151.0 [0..36] [336..217]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISFRKCLI FYQMSSMERQ NELQKITIIR VICSVQLISM IAVTAHSTAM PFLVRIANKT  60
   61 HFLPTTSVFM MEVLKLGFCL IITLFKSGSI KK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCHELHKTIW QNRLETMKVA VPAVVYAIQN NLYYIALANV DPTTYSVTLQ IRILTTAALS  60
   61 VCLLNKKLSW YQWGAQVMAL LGVVIVQLDK TNSHKEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.08
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [190-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGNFWIGVSA VVGMCWTSAF AGVYFEKMLK NSSADVWIQN IRLSILTLFF AGITMITTDG  60
   61 EAVFGGRMFE GWSNMVWLVT ILNSVGGLCI SLVMKYADNV MKTYCQSIAI GLTSLVSICL 120
  121 GERILTVYLV YGVTLVTSSV VVYSLFPVAP PALSDYHKLE QQDDVAELLK SSGVEDEEEE 180
  181 EDEIFGELEH KIEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle