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View Structure Prediction Details

Protein: CE29527
Organism: Caenorhabditis elegans
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29527.

Description E-value Query
Range
Subject
Range
SLC35F5 - solute carrier family 35, member F5
225.0 [0..1] [421..53]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATNRESTG CLDSKTVGIC LLLIVNVLWV LSSELTRFIF VDEEFRRPFF TVYVKSCTLI  60
   61 IYMIRYLFFE AKDDHNSYKI LITENSIDSE NYEISCESLA LEGYESVTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDSDVESVIV DGEKRQRKIR FAERREIRRM PASNAEDQRK ARLPYRHPTI ECQLYLSRHV  60
   61 KYTLFFFAPL WLLCSFTYQA ALAFTSVSSL NLVSSSSSVF VLAFAICFPS TNNRFSAYKC 120
  121 LLVAINIAGV LIVSHYIPSF LGALFAQMSA LAYAVYLFAF GHFEEKYGKL DINLMFGAIG 180
  181 VIALVLGTPT LNLLDRFGVE PLHPLPNATQ FSSILFSALI GTIVADYLWL LAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2npkA
Description: No description for 2npkA was found.

Predicted Domain #3
Region A:
Residues: [343-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMCDSLTTCL SMTVSIPLSF LADTVIRSKA PTLAQVIASI PILVAFVGAA YAQNPSTSIR  60
   61 KGLSKRVRKV ESLSPDNEHL MDSLSDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle