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View Structure Prediction Details

Protein: ain-2
Organism: Caenorhabditis elegans
Length: 624 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ain-2.

Description E-value Query
Range
Subject
Range
ain-2 - status:Partially_confirmed UniProt:Q86GT1 protein_id:AAO61448.1
353.0 [0..228] [624..1]

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Predicted Domain #1
Region A:
Residues: [1-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGDGWQGPG RGGPHHMNGG GGGRRGGGGG MHNQRIQQNP HHGGMNRMMP HGFRPQQGHH  60
   61 PSHMPPYGQR GNNQNQYGNR MQGGQGGYRG NQQRQQQQQP QQGFNMPPMM VPPGQPPFYG 120
  121 GNQPNHHHQQ PSFAPSPFSM GGGGGGSQGG PHEQHGPGGN QNGGFGVSSS SMDDYSMWTD 180
  181 ENDEDAKKKK SLRDKGLSGW GDADVSNSKP IRRWIVPEGQ EEDFETAMER CPSHLKKKAL 240
  241 NEEALRRRLT SENPQIVAQA QQQAEEEANA MMRIGRRPIV PSGWGDIPSE ISTDKSDSEF 300
  301 DQSSSRGWDE GSISGGGSGR HPSHHQSNDN SMWNSPSVGG GQSNSETRNP FFAQHMQQQQ 360
  361 HQQQHQPHYG GYGDNGVLDG GSLWSAAVMD GSSMVPPHPT MGVGSSASSS SIPIGMLMMS 420
  421 GSGNVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.09691
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [427-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGPPSSSSLL DEDGSQKKLA ENLKLAVQKG HLDISLLSLP HIPPNVLDLL TEILAVIPRL  60
   61 DDYEDELKKL GENRPSNYDE GASKEEKESW MSKDQKNDHD KAVIGVVTAK IEVTQLSKKI 120
  121 TEALIEAGLL PPQPQTSTSA NTSTNHLNHR GGPPPGSDGG AGPSTSRSGG GGAAGGDSFN 180
  181 SSGGGGPPDH YYDYSFLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle