| Protein: | efn-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for efn-4.
| Description | E-value | Query Range |
Subject Range |
|
|
424.0 | [0..1] | [343..1] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MKQFFEFLIT TFLLLGLAAA DEHIVYWNST NSLFRNRQPT IEVRMGDVVR FVCPDNEEGR 60
61 NDGEYLIVYE VTEFAMDDCA LESHSREVIR CAPEGTAEKV LRTQQLSGGR REDWKKQKVP 120
121 PKNVAQLIRQ LNPIPNGKEY QPGQTYYYMT TSTGKANGTN HRMYGLCESQ NMRLSMKVSA 180
181 SQPHPTRRAP TRRQEDFVTT ASAELMGGQE DEDSDNDNAH LLPRDLEGST NPKFRRPSQL 240
241 ETAGV
|
| Detection Method: |  |
| Confidence: | 53.0 |
| Match: | 1ikoP |
| Description: | Ephrin-b2 ectodomain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [246-348] |
1 11 21 31 41 51
| | | | | |
1 ENQQFMKVVQ MAQAGKTGTF ENEKEAIAQK SSEKDGWHPV NVQYVADLMN NAYQNADERI 60
61 SYQRDFEIHE ENDLAVKSLE YSSSSTSLST NFAILLAVIY VLY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
