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View Structure Prediction Details

Protein: frm-2
Organism: Caenorhabditis elegans
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for frm-2.

Description E-value Query
Range
Subject
Range
frm-2 - status:Partially_confirmed UniProt:Q304D7 protein_id:ABB51180.1
403.0 [0..1] [573..17]

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Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWMLRSLSA RFSRNRQQQQ KSQTQDASFD TKKFVQCKVL LLDGAHLNIV VPRNAVGSEL  60
   61 YEEVFYSLDL EERDYFGLQY TDPFNVQHWL DPTKKVAKQV AIGPPFTLRF RVKFFTSEPS 120
  121 SNLKEELTRY QFFLQIKQDI SSGRLQCPHQ LAIELAAFAL QSELGDYNPE LHTALFISEF 180
  181 RFHPEQDEKM EVEILERYKA CRGQTPAQAE LNYLNKARWI EMYGVDMHIV EGKDGNTYRL 240
  241 GLTPQGMLVF DGPQKIGLFL WEKLQKLDFK NKKITLVVEE DADQSNNGQI QLHTFVFHLT 300
  301 SEKAAKHFWK CAIEQHAFFR LKSRPIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.69897
Match: 2he7A
Description: No description for 2he7A was found.

Predicted Domain #2
Region A:
Residues: [328-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANRKIQFFRL GSTFKYRGRT EYETIHKEGA RLSRRQSCSF ERRPSQRYGP RQSHVTNAQI  60
   61 RDAKRAEMRQ QIIEQQRAND QQRTHAKSDP TSPHSIIQNV PLPTSPDLKK PVNNSNPFIS 120
  121 DPLTPSSSSS SSSHNLSHVT KI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [470-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVGTIGNLDT PSSSAAPSSY IPRPVVSTST SFSHPPPLPA HQSNSKIPRM SSASEQRKSS  60
   61 QPPQPAVRMQ TQFEEPRKYS QNGCAPPSRI VPPMQHQRRI VTDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle