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View Structure Prediction Details

Protein: CE29462
Organism: Caenorhabditis elegans
Length: 584 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29462.

Description E-value Query
Range
Subject
Range
gi|109109679 - gi|109109679|ref|XP_001091256.1| PREDICTED: alpha 1,2-mannosidase isoform 2 [Macaca mulatta]
686.0 [0..5] [582..47]

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Predicted Domain #1
Region A:
Residues: [1-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVRDDPGL PLYNTTSPKG HTFRRIRARA RHWFSTRNTP TKACIIFTIL LSIFVLITIC  60
   61 SQGEAKREQP IVENPEIIIN EQVIAGQKTK HSKEESAENL KPVHDIDRQI VEDEMDAPET 120
  121 GGGNEKIVKF TGPTNDRQKA VVKAFQHAWI GYKKYAWGHD TLKPVSKSYS DWFDTGLTIV 180
  181 DGLDTAIIMG LEDEATEATE WIQNTLTFEK DRMVNFFECT IRVLGGMMSA FHLTGKKMFL 240
  241 EKSVDLGDRL LSAFKSPSPI PYSDVNLLKR TATNPQWGAD SSLSEVTTVQ LEYRALSRAS 300
  301 GNSTYEDLTF NVFKHIHKIG CETHEGLCGM FINANTGNFK KDSTITFGAR SDSFYEYLFK 360
  361 QWIQTGKTID WLKEDYGKAM KAMEKYLYRN SKPNKMFFIG ELLSGQTYSP KMDHLVCFIA 420
  421 GTLSQGSQHG FPRKHLDMAE KIGETCHNMY DNPTGLGPEI AHFNMIPGKE DLYVKPLDAH 480
  481 CLLRPEAIEA WFYLYRFTGD KKYQEWGWSA FQAIEKYARI PTGGYSSISN VKQINVRFRD 540
  541 SMESFLLGET FKYLYLLLGD DQTVLPLDKW VFTTEGHPLP IYDH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 179.0
Match: 1x9dA
Description: Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosyl-oligosaccharide mannosidase activity 7.089685350864 bayes_pls_golite062009
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity 6.95179264736435 bayes_pls_golite062009
mannosidase activity 5.20286438265852 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.31319275372149 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.65589746311782 bayes_pls_golite062009
hydrolase activity 2.67964748309919 bayes_pls_golite062009
binding 1.49199031708525 bayes_pls_golite062009
catalytic activity 1.31873306707813 bayes_pls_golite062009
cation binding 0.362242764130218 bayes_pls_golite062009
metal ion binding 0.362242764130218 bayes_pls_golite062009
protein binding 0.36081692928767 bayes_pls_golite062009
ion binding 0.355220167272296 bayes_pls_golite062009
calcium ion binding 0.121126738064555 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle