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View Structure Prediction Details

Protein: CE29449
Organism: Caenorhabditis elegans
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29449.

Description E-value Query
Range
Subject
Range
CE32142 - WBGene00016117 status:Partially_confirmed TR:Q18183 protein_id:AAK31453.2
432.0 [0..1] [369..423]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKDECPVLT LVLCNARVIL AYDWLDDLKQ FLNLYTDFVP KYSDEIPYHL TESGRRQTFS  60
   61 KTHDGAIIER NAHATDSASS HF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTFSFKITHR DSDLYLLENL FVKNSCNNSV NFCYRSCQND LPIVVQGCSC FEGSYSRIKN  60
   61 YKEAQKKSLI PINVPQPPSK PIDIAIYMIQ TEHTDLWILD DLQSNSIPLL RLSVAHVCLK 120
  121 KTGERIIASF HVSMDYFNQR IFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WEPVIEEWKI HRFLHNKKDL KQTIEWVAET KTPLLINKAS IGEGTLLFTK MADSKGHLLD  60
   61 MYCHVRLGVA QAISVSLWVP YWIVNKSGIP LIIQQEAVKW EAAGQMEEHE KAKDRHPLMF 120
  121 SFADENCPKA CRLSCSSLCQ YHNVWRTRII GNCCIVNQML DRTMMIGASR SPAELNCTST 180
  181 WLLCYNLVGG ELVSLSTKQY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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