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View Structure Prediction Details

Protein: fut-3
Organism: Caenorhabditis elegans
Length: 400 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fut-3.

Description E-value Query
Range
Subject
Range
gi|157752036 - gi|157752036|ref|XP_001679730.1| Hypothetical protein CBG02466 [Caenorhabditis briggsae AF16]
gi|39596933, gi|... - gi|39596933|emb|CAE59160.1| Hypothetical protein CBG02466 [Caenorhabditis briggsae], gi|187037389|em...
380.0 [0..1] [400..1]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRPASVYR YLLLGVCALL GIYTVYSIIG YDDGSHVPIH RPQRHLYLTV SQDRIGSRFG  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [61-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLAPKRILYW TTIFGATVPS TALSDCPGLT DRCVIDTNRH QLDSADAVVF HAADISKFPL  60
   61 PVSRKPDQIF VFNSMETPDN SGRFAVPDGF FNWTSTHLYS SDAIHKYGTF LIPTQIAESR 120
  121 GFKVQSYYVQ PKRLVKTMKG IFGLISNCHT KSKRELALQE LGKHINVTIG GKCASDDRLK 180
  181 SICPAGVECI DVFEQYPFYI AIENTVCNDY VTEKIWSRIT VPSIPIVMRR RVYQNILPPK 240
  241 SFIAMDDYKN PSEMANHLRS LEANSTAYGE YFEWRQKGLW TSAPWNAPGY RNGLCRVCEL 300
  301 LWKAKDNETE VYKSYDNIWK WFDNESQCET DEFVRSWLSG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.09691
Match: 2nzwA
Description: No description for 2nzwA was found.

Predicted functions:

Term Confidence Notes
transferase activity, transferring hexosyl groups 5.49550363797801 bayes_pls_golite062009
mannosyltransferase activity 4.92120689306219 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 4.33256440708991 bayes_pls_golite062009
UDP-glycosyltransferase activity 3.87675156841305 bayes_pls_golite062009
catalytic activity 2.65148466065976 bayes_pls_golite062009
transferase activity 2.6268567881241 bayes_pls_golite062009
glycogen phosphorylase activity 1.55216954018473 bayes_pls_golite062009
glucosyltransferase activity 1.5162351691061 bayes_pls_golite062009
UDP-glucosyltransferase activity 1.21599854394093 bayes_pls_golite062009
phosphorylase activity 1.16838250569299 bayes_pls_golite062009
alpha-1,3-mannosyltransferase activity 1.0711849620868 bayes_pls_golite062009
binding 0.399722153246393 bayes_pls_golite062009
alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity 0.333194028937286 bayes_pls_golite062009
acetylglucosaminyltransferase activity 0.325800456086481 bayes_pls_golite062009
protein binding 0.198267161626932 bayes_pls_golite062009
carbohydrate phosphatase activity 4.32270241054966E-4 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle