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View Structure Prediction Details

Protein: CE29373
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29373.

Description E-value Query
Range
Subject
Range
gi|67665375, gi|... - gi|67665375|ref|ZP_00462639.1| Ribosomal protein S1 [Burkholderia cenocepacia HI2424], gi|67101075|g...
gi|67659525, gi|... - gi|67659525|ref|ZP_00456886.1| Ribosomal protein S1 [Burkholderia cenocepacia AU 1054], gi|67092904|...
286.0 [0..9] [337..262]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCRFYENQF PDVEETVVAN VKMIADMGAY VRLSEYNDKE GMILLSELSR RRIRSVNKLI  60
   61 RVGRSESVVV IRVDKDKGYI DLSKRRVYQK DLKQCDERFA NAKMVNSILR HVAEQVGYTT 120
  121 DEELEDLYQK TAWHFDRKEK RKAASYDAFK KAITEPTILD ECDISADIKE KLLEDIRKKL 180
  181 TPQAVKIRAD IEVSCFDYDG IDAVKAALIA GKNCSNGTFP IKINLIAAPH FVVTTQTLDR 240
  241 EGGIEAVNSI LDTIKNAIEG FKGKFTIKEE ARIVTDIDDE KKKGDGDEDE EESEEDEDEE 300
  301 EDEDDDGLMA PKGLDQQVDA EEASRDNRKK AGDDEDSDEE DD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.522879
Match: 1q8kA
Description: Solution structure of alpha subunit of human eIF2
Matching Structure (courtesy of the PDB):

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