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View Structure Prediction Details

Protein: acs-4
Organism: Caenorhabditis elegans
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-4.

Description E-value Query
Range
Subject
Range
gi|157758595 - gi|157758595|ref|XP_001671641.1| Hypothetical protein CBG08359 [Caenorhabditis briggsae AF16]
gi|187032723, gi... - gi|39583706|emb|CAE63810.1| Hypothetical protein CBG08359 [Caenorhabditis briggsae], gi|187032723|em...
577.0 [0..1] [731..1]

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Predicted Domain #1
Region A:
Residues: [1-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKVSVYDS SKDKTLGQVV KGESPIWIRV AMAILRVWFF IYDCLNYLPY QLFNSPTEKL  60
   61 RKSERVKANW VDDRDGPIRN IQGHASETFP GKDTVDKVWR KCVELYDESP CLGTRQLIEV 120
  121 HEDKQPGGRV FEKWHLGEYV WQSYKEVETQ VARLAAGIKD LAHEEQNPKV VIFAETRADW 180
  181 LITALACFRA NVTIVTVYAT LGEDAIAHAI GETEATILVT SSELLPKIVT LGKKCPTLKT 240
  241 LIYFAPVDQK APAPELAPFR DQFKHVLSLS GLLTRNQEQV KESTAVKSDI ALIMYTSGTT 300
  301 GQPKGVILLH QNVVAALLGQ GDGVGIICNA DTYIGYLPLA HILELDAELT CLTKGAKVGY 360
  361 SSPLTLHDRA SKIQKGTHGD CHALRPTLMA AVPAIMDRIF KAVSEEVAAS PRFMQELFKL 420
  421 NYERKRSRYL EGYCSPFLDR IVFKKIRRLL GGKLRGVLSG GAPLNAETQR FMNICMCCPV 480
  481 VQGYGLTETC GAACVADIND LSTGTVGPPV RCSDIALREW SEGGYSPFND PPQGEILISG 540
  541 ENISPGYYKQ PEKTAEDFIT YKGKVYFATG DIGQKRDDGS LLIIDRKKDL VKLQHGEYVS 600
  601 LAKVECALLN CPIVDNICVY GSGMEDSVVA LVVPNQKHLE KIAEAEGVST SEMKTMCEDK 660
  661 KVIAAYKKQL EEHAKKSKLS RSEIPAAIHL CPEIWTPDTG LLTEALKLKR KPIQMAYQKT 720
  721 LDDLYKQLKK N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle