| Protein: | wrt-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 550 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrt-8.
| Description | E-value | Query Range |
Subject Range |
|
|
613.0 | [0..1] | [550..80] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MNYLLLVSGL LSVWQPVFGS RCGESTIPFS LEILPSGHPV LGCARPTCFG WHPKGYQLPT 60
61 TAKFSRLNRK LDGFLRDDSL FTYPFETDSS KIYKVQNSTC EPGFQSSKCD SKDQWVGGIE 120
121 PETDAFQDVA YQCCTYAPLR ESTDRNIATV SAGEIVIGGE VYQNESQYAF DYISNIEKSM 180
181 DE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-329] |
1 11 21 31 41 51
| | | | | |
1 NGEVYYEVNI RRFACLDPHN ADRRIDEVWS SENTIRKVNG QKPIAQQAPN VAVNAPIEAG 60
61 TFDGEVVDGQ TVVIEEIIAQ QGFIVENETT VAPFAGPFQA QGFQPRFGAP QGFQPAFQQP 120
121 PPQQFFPQNF QPVVQQPVQF PAQPVGY
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [330-550] |
1 11 21 31 41 51
| | | | | |
1 APYAPAGWQL HYCFPADAEV NVYEKGVKRM DELEVGDWVQ ALHGKETTYS PVKYWLHRDP 60
61 EQEAEFVEFL LENGESFTLT EKHLVFATDC QQNVKNLDDL NPTSTGKINI GECFFMAQPE 120
121 NASKFQKVQI LDIQRVRKTG IYAPMTSLGH LLVNQIHTSC HSEIDHHLLQ NSFFKHVLKL 180
181 KNRISKYFWN EESNTEGNIG TSLNFLIEIF ELIVPSKMIS Y
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1at0A |
| Description: | 17-KDA FRAGMENT OF HEDGEHOG C-TERMINAL AUTOPROCESSING DOMAIN |
Matching Structure (courtesy of the PDB): |
|
