| Protein: | seu-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for seu-1.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..10] | [554..186] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MSSIRNQNDN RRPTFRDHRT PQFSGRGGSG GGGRRLQNPA HYPQRRDMSP IRRSSAISPV 60
61 RRSQDHRQRS PEVRRHRSPE KESKDAVVTS TGSSRGATSA SVTSSSRRHE SGERHRETHR 120
121 REDKEKKPEK STDRDADRSN NIAARIQAPV VSSSTHHHHS N
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [162-571] |
1 11 21 31 41 51
| | | | | |
1 RHENRKSTAV KRPAADNRPM TYSTDVSVSR HSENRRKSSS DVSRRHGDKE KRDRKREDVK 60
61 KKSNGERSSS SGRRREEDHK RKSESSRKEK KDEDVKEKVV DENKVEDEAV EMQGLVEVDC 120
121 CEEEETIEQA KEHGSDEPER PESHQSAHSA AVSNASHHSD SEEELDYEED DIDVDLDGDI 180
181 DVETMKMAAR GDLKVDDTTD EDEINDVKDE TMEEQKEDGE PEKKKPRTSE NDDKDKKHHG 240
241 SSSSNSHRRR EDDKDRRQSS DHHKERRRSP ATRQRATDHK ESRRSEGTST RVESAASAAA 300
301 PPPPPSSSSS SKRSHEAAAR IRAPSPPRRS FGDRGNRSDE HHGGSRHMDV GPQRRRLQDH 360
361 RVRDDGRRVS SFEDRKRPER GFQDSGRRRR PSPPRGRPGE KVVQSYRNGV
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
