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View Structure Prediction Details

Protein: CE29031
Organism: Caenorhabditis elegans
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29031.

Description E-value Query
Range
Subject
Range
gi|76614612 - gi|76614612|ref|XP_875648.1| PREDICTED: similar to Splicing factor, proline-and glutamine-rich (Poly...
150.0 [0..3] [189..659]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINSSRLSI SSTGRCLLAS AMSQMDEVFG VQKRQMGRRQ PKQGKPPILP PSKKVLYHVV  60
   61 HAPWQKPEDV EELLWRRHAY NNAVISLREV FRAELAQNAS HGQGIEAMKE AEALELDELI 120
  121 AQNEKRNEEK RAARKEREAE DAKETKSVIL EEIRVELEKR NAGKKQAEDE VKNAISRSSE 180
  181 FITRSNLETK ILEALEKPTI YDFAIDRAGN KYFVPEPVKY QEGTPTRQKG RLYDQTLGTQ 240
  241 HGTIEEANKI QQKSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle