| Protein: | mod-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mod-5.
| Description | E-value | Query Range |
Subject Range |
|
|
559.0 | [0..1] | [671..1] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MLRWHSVRRK QHQQLQAELS SGAASMLSAP ESRRVSRSMS VKAPTASEYM PLSVADKPLT 60
61 LTVSTSHSID PNEPIAALGG LTPTKEGRVA ALR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [94-671] |
1 11 21 31 41 51
| | | | | |
1 RRSSMVRDKW ATKMEFLLAV VGYAVDLGNI WRFPSVCYKH GGGAFLIPYF IMLMIGGLPM 60
61 FYMELVLGQF HRSGCVSIWR KVCPLFRGIG YGICCICTFI AIFYNAIIAQ AVYFAIVSLS 120
121 KIWDSEVPWA SCGNPWNTPR CSDDLNVTIS RNGTPLTTPS EEYYLYKVLE VQKSTGFDDL 180
181 GGVKTSMAVC LLAVFIMVYF ALWKGPQSSG KIVWVTATAP YIILSILLIR GLLLPGAKNG 240
241 LYYYVTPDFE KLKDPAVWSA AATQIFFSLG PGFGVLLALS SYNDFNNNCY RDAVTTSIIN 300
301 CATSFFSGCV VFSTLGYMSL LTNKPINEVV GEHDASLIFI VYPQALATMD YSCFWSFIFF 360
361 VMLITLGIDS TFAGIEAFIT GFCDESRFLS KNRKWFVLVI CIIYYFLSFP AISYGGQFVI 420
421 PFLDEYGVSL SVLFIVTCEM IAVCWFYGVD QFSKDIRAML GFYPGIYWRV CWTCSPVFIS 480
481 VIFIMTVYNS SFKPIQMASY TFPWWSVILG WFLRLLSVLA IPVFAIIYLL SGTGTLYERF 540
541 RWAITPQQRR NSATSLAADP TQIIDSSLLD PIHTLTPV
|
| Detection Method: | |
| Confidence: | 57.69897 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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