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View Structure Prediction Details

Protein: CE28976
Organism: Caenorhabditis elegans
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28976.

Description E-value Query
Range
Subject
Range
gi|7509593 - gi|7509593|pir||T33995 hypothetical protein Y38A10A.6 - Caenorhabditis elegans
167.0 [0..1] [203..1]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFAHFSPQY TTFNILYGFI DQFVTNIGPK MPVDSKKLVK KACQHIKPVE KFECETQRST  60
   61 TTDGETIKFD YMWATHLSDE DFEWVFSLFK ENMYDMYHKS QWGYDENSKR NELRATTSRF 120
  121 IIAKNSKGDK IGYTTYRFVV DHNIPVAYCW ELQIVPAYQN KGIGGMMLDT LEKLSSKTNM 180
  181 SKVMATVFLY NGPSLGFFHK HGYNSDVTCP SDDSGLDYAI LSKETPST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.80717089094108 bayes_pls_golite062009
transferase activity 1.70550990165061 bayes_pls_golite062009
N-acyltransferase activity 1.32958400692204 bayes_pls_golite062009
N-acetyltransferase activity 1.18612587745848 bayes_pls_golite062009
acetyltransferase activity 1.02322587046875 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.514005279691286 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.462080003433853 bayes_pls_golite062009
acyltransferase activity 0.450499160000604 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle