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View Structure Prediction Details

Protein: CE28939
Organism: Caenorhabditis elegans
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28939.

Description E-value Query
Range
Subject
Range
gi|118793568, gi... - gi|118793568|ref|XP_320931.3| ENSANGP00000017579 [Anopheles gambiae str. PEST], gi|116115872|gb|EAA0...
160.0 [0..1] [155..72]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHMMMEMYF HFRIEEPILF REWKPLNTTA YVFSCIEIFL IAFCLEALKF GRTKLSPKVK  60
   61 IVEKKVDCCC STEKDGLWNI PETIPLTQKT VTLAPFTRDS LISKFHMASS LLVFVQHFID 120
  121 YSLMLVSMTY NWPIFLSLLA GHTTGYFFLG PMMTVEESEA AGSCCS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 15.69897
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle