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View Structure Prediction Details

Protein: CE28937
Organism: Caenorhabditis elegans
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28937.

Description E-value Query
Range
Subject
Range
Ctr1B-PA - The gene Copper transporter 1B is referred to in FlyBase by the symbol Dmel\Ctr1B (CG7459, FBgn00624...
gi|220957234, gi... - gi|220957234|gb|ACL91160.1| Ctr1B-PA [synthetic construct], gi|220947864|gb|ACL86475.1| Ctr1B-PA [sy...
133.0 [0..1] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHNSMDMDM NQGPFMWMWF HTKPQDTVLF STWNITSAGK MVWACILVAI AGIILEAIKY  60
   61 NRRLIQKRQS PSKKESYISR LLSTMHFFQT FLFFVQLGFS YCLMLIFMTF SIWLGLAVVI 120
  121 GLSIGFLIFG GRSE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 49.657577
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle