| Protein: | cogc-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 681 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cogc-2.
| Description | E-value | Query Range |
Subject Range |
|
|
596.0 | [0..1] | [681..1] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MGTLHGEKTM FASPNTFYID ESKLCFNKTH FNREDFNVER FMNLARQKSD LKTIQQDLRL 60
61 YLKSVQNSMI ELINDDYADF VHLSSNLVSL QDSLNKIEQD INRIWDEFKE STRESVGMAE 120
121 RIEQKCDELC SNREKQIEIR DRIYFLVAIE KLSEMLLHPP RKCSALWLQK AASFASELKG 180
181 STFPHSEEEN AAEKIILSQL EAVLCAEGVR SAAGDCQNLP LIYSILSLTE STHSLTALLV 240
241 SDLLYAEFVN EKHDESNQLK LLKQVFESVK KMRETWAEKM GTEHFRGNIR RFLDETLLTF 300
301 ILTFIDKCMG AVAVPSDTRL FHECFLLTQE FIDNWPSSHT CRAMLKSIRD KFNLLVYFKL 360
361 ETHRFGKQCD QLMSPEMFAE
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-503] |
1 11 21 31 41 51
| | | | | |
1 PETSENRENT PQLHCGVSRA IITAIEHVWS DDVYLPPIVD KLWDFTLKLL LKHFSWSQTM 60
61 KNYFMEEKRD WTSMVTLRSD TGNLHQLVFD FALESIWGKF HDITVDTAPF GQCLTKHGRS 120
121 IDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [504-681] |
1 11 21 31 41 51
| | | | | |
1 LCVQIDDSII EMFSEVLHQE IAQVSDVPKQ YRWTKKSPPT THSKYVVTAI EMVENLKEKL 60
61 CCEEHPHTDE IVRKVNLSAF NYFVGKGNEV LDSVEATGSS LSRFKRKTTT DSGSTVTDDD 120
121 KIKQQIYHDA KYFLSYAENL VFSQADLTGL QEVVNRFDKD ARSAIVQEKN QNEEAGNA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
