| Protein: | CE28807 |
| Organism: | Caenorhabditis elegans |
| Length: | 248 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28807.
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..2] | [247..3] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MVKKQSMPEN KELVEYKQKL FAEAERLVKE EFPKKVIEFD ALLKSPKLSY DRLAEILPDK 60
61 SLNIPIPDAL NGTTDSDEPA VKRQRVDEKP KGAPIFA
|
| Detection Method: |  |
| Confidence: | 15.045757 |
| Match: | 1avoA |
| Description: | Proteasome activator reg(alpha) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [98-248] |
1 11 21 31 41 51
| | | | | |
1 FSSGTVPCNE NLAQLMDLVR PKLRDAVEQC NNVKMWITLL IPRIEDGNNF GVGIQEETLS 60
61 EVRNVESEAA SFLDQMSRYF TTRGKLITKI AKYPHVDDYR RAILDMDEKQ FINIRLVVLE 120
121 MRNHFSTLHD MIMKNYEKIK VPRTSNTEHL Y
|
| Detection Method: | |
| Confidence: | 63.30103 |
| Match: | 1avoB |
| Description: | PROTEASOME ACTIVATOR REG(ALPHA) |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| proteasome activator activity | 5.59640159138257 | bayes_pls_golite062009 |
| proteasome regulator activity | 4.54794772700869 | bayes_pls_golite062009 |
| binding | 2.01347128874017 | bayes_pls_golite062009 |
| protein binding | 0.834565661881528 | bayes_pls_golite062009 |
