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View Structure Prediction Details

Protein: tin-10
Organism: Caenorhabditis elegans
Length: 86 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tin-10.

Description E-value Query
Range
Subject
Range
gi|50766075 - gi|50766075|ref|XP_422986.1| PREDICTED: similar to translocase of inner mitochondrial membrane 10 ho...
121.0 [0..1] [85..118]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDAQMAQV AELEVEMMSD MYRRMTNSCQ AKCIATAFRE SELTKGEAVC LDRCVAKYLD  60
   61 VHEKLGKRLT SMSQGDEAAL QKIAQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2bskB
Description: Crystal structure of the TIM9 Tim10 hexameric complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
P-P-bond-hydrolysis-driven protein transmembrane transporter activity 6.14865333952665 bayes_pls_golite062009
macromolecule transmembrane transporter activity 6.14865333952665 bayes_pls_golite062009
protein transporter activity 3.96569591038426 bayes_pls_golite062009
protein transmembrane transporter activity 3.05578860381335 bayes_pls_golite062009
transporter activity 2.98936530239986 bayes_pls_golite062009
substrate-specific transporter activity 2.87815769573142 bayes_pls_golite062009
binding 2.33109351196002 bayes_pls_golite062009
transmembrane transporter activity 1.67782980643723 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.42890247609405 bayes_pls_golite062009
protein binding 1.23510164189791 bayes_pls_golite062009
primary active transmembrane transporter activity 1.15847548838424 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 1.15316743403707 bayes_pls_golite062009
active transmembrane transporter activity 1.10003802565492 bayes_pls_golite062009
unfolded protein binding 0.0997632819038001 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle