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View Structure Prediction Details

Protein: inx-16
Organism: Caenorhabditis elegans
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-16.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
388.0 [0..6] [357..2]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLGNIKTY AQTVTSLSDN DDTSIDRLNY VVTTSILIAF SLLLFAKNYV GEPMQCWTPN  60
   61 QFAGGWESFA ESYCFIENTY FVPMQDSNLP AAETREGREM IYYQWVPFLL VIQALFFCVP 120
  121 RAFWIIY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSYSGLTIAD MITAARQNGK QLEGADEALE QVAMINWRTE QQKGHGSRIF NCYLVMKLLI  60
   61 LLNIVLQFFL LNSFLNTAYT FWGWGIFWDM VNGRHWQESG HFPRVSFCDI NVRELGNIHH 120
  121 WSLQCVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNMFNEKIF IFLWFWFAFL LVATAGDFVI WVWRRFDSNS KLGFILDLLN QEGIDHSPQK  60
   61 ASELYKNVLR DDGVLFLRLL DSNSGRLNSE ELMKKIYNIS VGHATDLNTP IEEHATSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle