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View Structure Prediction Details

Protein: mig-23
Organism: Caenorhabditis elegans
Length: 552 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-23.

Description E-value Query
Range
Subject
Range
gi|7506438 - gi|7506438|pir||T16696 hypothetical protein R07E4.4 - Caenorhabditis elegans
669.0 [0..1] [552..1]

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Predicted Domain #1
Region A:
Residues: [1-552]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSLRFTIL AVSAMIFFPV IVFIYVVEAH TSPKVIADDQ ERSYGVICDA GSTGTRLFVY  60
   61 NWISTSDSEL IQIEPVIYDN KPVMKKISPG LSTFGTKPAQ AAEYLRPLME LAERHIPEEK 120
  121 RPYTPVFIFA TAGMRLIPDE QKEAVLKNLR NKLPKITSMQ VLKEHIRIIE GKWEGIYSWI 180
  181 AVNYALGKFN KTATLDFPGT SPAHARQKTV GMIDMGGASA QIAFELPDTD SFSSINVENI 240
  241 NLGCREDDSL FKYKLFVTTF LGYGVNEGIR KYEHMLLSKL KDQNGTVIQD DCMPLNLHKT 300
  301 VTLENGENFV RRGTGNWNTC SNEVKKLLNP ESSSEVCKAE AAKCYFGAVP APSIPLSNIE 360
  361 MYGFSEYWYS THDVLGLGGQ YDAENIAKKT QQYCSKRWST IQAESKKQLY PRADEERLRT 420
  421 QCFKSAWITS VLHDGFSVDK THNKFQSVST IAGQEVQWAL GAMIYHMRFF PLRDSSRNLI 480
  481 VKETHSSSES LWAPLFFLSA VFCLFVLVCA KEQSVLCFDD KRRSSFGMSR SQYSYKMLKE 540
  541 NRTSSSFLEN FA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.09
Match: 2floA
Description: No description for 2floA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle