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View Structure Prediction Details

Protein: seld-1
Organism: Caenorhabditis elegans
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for seld-1.

Description E-value Query
Range
Subject
Range
gi|91223510, gi|... - gi|91223510|ref|ZP_01258775.1| phosphoribosylaminoimidazole synthetase [Vibrio alginolyticus 12G01],...
301.0 [0..21] [366..1]

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Predicted Domain #1
Region A:
Residues: [1-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRIERILEG FDPVSNGLDE DFVLTKLTGM KGCGCKVPRN VLLQLLQTFK TDLVINNDEV  60
   61 DIGLDSCVIP LRHPGLRLVQ TTDFFYPLID DPYIMGRVTC ANVLSDLYAM GVSECDNMLM 120
  121 LLAVAIDLNE KQRDIVVPLF IQGFKDAADE AGTKIRGGQT VRCPWLLLGG VATSVAHESE 180
  181 IIKVDQAVPG DVLILTKPIG GQVAVNSYEW IKKKNGKIEE LNLEIPKIEK AFKQVCEQMS 240
  241 RLNRNAAKLL HKYDAHSSTD VTGFGLLGHA ENLARVQKQP MEFIIEKLPI IEYMDEIADK 300
  301 MIAKGGEGFK LYQGTSAETS GGLLIAMSEE NAKKYIAELS SLDNAPAWII GKVTAKTTDS 360
  361 SIARILPDAV RISVPSHI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.221849
Match: 1cliA
Description: Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain; Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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