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View Structure Prediction Details

Protein: CE28593
Organism: Caenorhabditis elegans
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28593.

Description E-value Query
Range
Subject
Range
gi|74005970 - gi|74005970|ref|XP_536105.2| PREDICTED: similar to solute carrier family 41 member 1 [Canis familiar...
346.0 [0..24] [474..36]

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Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGGGIGDG KKDYQSAVHE GLTTFDQLGI ALEDVGKSMD AETATPGGSL FSRVMNENSS  60
   61 LKSRTYDHSN DLVNMSVIPA ESSYVLFFQV LFPFAVAGLG MVFAGLVLSI VVTWPLFEEI 120
  121 PEILILVPAL LGLKGNLEMT LASRLSTLAN LGHMDSSKQR KDVVIANLAL VQVQATVVAF 180
  181 LASAFAAALA FIPSGDFDWA HGALMCASSL ATACSASLVL SLLMVVVIVT SRKYNINPDN 240
  241 VATPIAASLG DLTTLTVLAF FGSVFLKAHN TESWLNVIVI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 2yvxA
Description: No description for 2yvxA was found.

Predicted Domain #2
Region A:
Residues: [281-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLFLLLLPFW IKIANENEGT QETLYNGWTP VIMSMLISSA GGFILETAVR RYHSLSTYGP  60
   61 VLNGVGGNLA AVQASRLSTY FHKAGTVGVL PNEWTVSRFT SVQRAFFSKE WDSRSARVLL 120
  121 LLVVPGHICF NFLIQLFTLT SKNNVTPHGP LFTSLYMIAA IIQVVILLFV CQLLVALLWK 180
  181 WKIDPDNSVI PYLTALGDLL GTGLLFIVFL TTDHFDPKEL TSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.49
Match: 2yvxA
Description: No description for 2yvxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle