| Protein: | CE28587 |
| Organism: | Caenorhabditis elegans |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28587.
| Description | E-value | Query Range |
Subject Range |
|
|
435.0 | [0..1] | [472..1] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MSINYFKFDC DDDLCKYHGI AHLHCGHKRC NFASNDALLI SNHLSVFHLK NSEIPDDRIF 60
61 YHIDVSCGSD RCQFNRNSSH WHCAKCQTGF EIVGLHCCPI TSLPKRLDSC SRPFCKLKKK 120
121 AHFHCKICDQ VVWNTNQMHL RTLHFLILIG IFIGGQ
|
| Detection Method: |  |
| Confidence: | 17.154902 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [157-338] |
1 11 21 31 41 51
| | | | | |
1 TLGCMKKVCG NNAKNDFRRC PDTDGSCGNY HTERTSGEII DGVDVRCHLG EPIYAPIEGE 60
61 MYFWRPYGGK REKSCADQGV RIEGTGQWQG YAVHISSVKL SFFGGHVEAG DEIGEALNRY 120
121 CFNDRGQNDV EPHVEIRLYK EGRLIDPTHH LQNCMCTGQI CESNTRNVLL GDPFKTDKRY 180
181 NG
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 2gu1A |
| Description: | No description for 2gu1A was found. |
|
Region A: Residues: [339-472] |
1 11 21 31 41 51
| | | | | |
1 VRGWDVECQM IDDDDEDSPR APMIYSPIAG EIVGRIRLFT DSNGAYTGCD NDGIFIVGID 60
61 DWLGFEARLY NVKARADIGF GRKRIIQGEP IATRLACENS PDSVFVEIRF EGRVVNITDI 120
121 ITAANCKTPN FPVF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
