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View Structure Prediction Details

Protein: taf-10
Organism: Caenorhabditis elegans
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-10.

Description E-value Query
Range
Subject
Range
taf-10 - status:Confirmed UniProt:Q21172 protein_id:AAA97996.1
233.0 [0..1] [179..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDPEQYEPS SSTESVLMPP PALPQYFQRP AAAPQVYSTL EPSVQNLRSS LHKPLTGNQQ  60
   61 QFVQKTLENV QKNPSQDDTH EFINQLADYP PTIPDSVTLH FLKSAGVDGS DPRVTRMISL 120
  121 AAQKHVSDII LDAMTSARMK GLGQTKKGTK DTKYTLTEEL LDEILKEYGH QNTRPPYHT

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Detection Method: FFAS03
Confidence: 1.31
Match: 1f1eA
Description: Archaeal histone
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.37193420606584 bayes_pls_golite062009
DNA binding 0.400531218539453 bayes_pls_golite062009
protein binding 0.32342954268389 bayes_pls_golite062009
nucleic acid binding 0.245546411181381 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle