YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE28522
Organism: Caenorhabditis elegans
Length: 519 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28522.

Description E-value Query
Range
Subject
Range
gi|73961599 - gi|73961599|ref|XP_855035.1| PREDICTED: similar to glucocerebrosidase precursor [Canis familiaris]
583.0 [0..5] [519..21]

Back

Predicted Domain #1
Region A:
Residues: [1-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNISVSLL IFLAFYGFSS DAKSLPCSEV KKEYGIVCRC NATYCDTIEP LGTVTSGKAV  60
   61 VYTTSRNGKR MNRSELKHTT SSTAKTKVYV NTTQSFQPVM GFGAAFTDAA GINMKMLPQT 120
  121 MQDQIIQQYF SDDGLGYVFG RVPMASTDFS THEYSYDDVK FDFDLKNFNL TVEDLQYKIP 180
  181 FIKKAMTASG GKLKLFATPW SSPGWMKTSG RMVGAGELLG DQNGKYYQTW AQYFVKFFEA 240
  241 YHAQGIDFWS LTPQNEPTTG IDPLWKWQTL FFDASMERNF IKKLLGPALA SSPVTKNLKI 300
  301 MINDDQRINL PHWPNVILTD PTAAQYVHGI AIHWYEDFID PATVLTETHE KFPDYFLLAT 360
  361 EACAGYFPAD GPKLGSWSRA EQYANDLIKD MGNWVGGWVD WNYILDLQGG PNLAKNFVDS 420
  421 TIIVNATAQE YYKQPIWHVM AQFSKFVKPG AIRVGINIIE KSVDVEGLSF LNQDGTKTVV 480
  481 LLNKNEVLSF DVAISDVSAP NVIYDLTIQP NSLITIVYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 158.0
Match: 2v3dA
Description: No description for 2v3dA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
hydrolase activity 1.107656067558 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle