| Protein: | snn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 401 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..2] | [401..235] |
|
Region A: Residues: [1-305] |
1 11 21 31 41 51
| | | | | |
1 MKDAKVLLVI DSHHVDWSKY FRNHTEYAIR VEQGDIDELD VMCTEKNCTV ELNTPGKDVR 60
61 TFTPSAVFLG AGATRCAQLK TITRAFIAAH IPFLNSHTSA VAFLDRNNLK KQLKKITLSD 120
121 GASIPMLPIV HYPHFHKFHQ SQSSTYPMVV SVNEGFQGIG KIKVNNHEEL CDVEGMLQIM 180
181 SKGDTEVEVQ PFVDAKYDLH IQKIGHEYKT FIRRGICKHW KSNVGSSVLE QISTCERHKK 240
241 YLKAITDHVG PMHICSIDIL VSKEGREFVH DVNDVIAYFG ESAEDDRRAA SLLLRALVAP 300
301 RITSP
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 1i7lA |
| Description: | Synapsin II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.55682538146294 | bayes_pls_golite062009 |
|
Region A: Residues: [306-401] |
1 11 21 31 41 51
| | | | | |
1 IAAEPPATSP TTSAVTNGHG NHGPAPAVPT RRLPPHPSSS SAAPPRGHMS DKVESRHKDH 60
61 YDPPPQIPRT GSRESVSYVD DTMGQLKRTF AGFFGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
