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View Structure Prediction Details

Protein: CE28474
Organism: Caenorhabditis elegans
Length: 653 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28474.

Description E-value Query
Range
Subject
Range
CE28475 - status:Partially_confirmed UniProt:Q95R06 protein_id:AAK73888.1
1138.0 [0..1] [648..1]

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Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLIDSRVL YESDFSIFNG RLCSLRISAV TNNEEGIEKI RITSPSDATI LLDTSISSDE  60
   61 CSSFIEILKE ISTARKSDPS ILGPRIETIH SENEYPFQMV IEPINREKHS GKTLPLSHPP 120
  121 PQERCDYVLQ LYAKEKVQHQ SQKTKVEELT KQLQQARVDY NTLKQRCDFQ EKEIALLRQI 180
  181 TSSTGSGNRK RSRDDSETTH IKKRRCGCGD DGESCGSDCD GMDDDEEDET DTDVQMFRAA 240
  241 TAQLQMAAAG RNTQNGTSSH QKLKRKIPKS QSVSIGNARG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [281-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLPNLLQP KLEESDDGYN YSGRSSTQSN IDKLELAVRR ESIVDIGRAV IDGIKNKTLT  60
   61 ENQLEEFCKT THRPNISIFR FYKDSEECTK EENEAIMMGQ TVMMKMLDPQ EKAIAGVQAS 120
  121 ISSLSASFAN QTKLGLIKHQ RLTRSYVTLP VDYFPSIDLT EAYNSSNLFG ADATMQLTNF 180
  181 YQTVLKNVLN PVYMIWIYTY RPSTVRTCDK HFVEFPQNVI TTLFDMTTDI VGLYLPEYLL 240
  241 DGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [524-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDPMDPFLLT IDAVDPFEEI MRRRTERKLA NTTFNHALGR AMKNLRSYHY DPTRGILLNC  60
   61 SEKKNCGMHL QWEQMRKFRE YCRKENVACD DATPEEMIAF NLRASKVHYE DYSPGDASTS 120
  121 LNNINPATET 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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