| Protein: | tra-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tra-4.
| Description | E-value | Query Range |
Subject Range |
|
|
625.0 | [0..61] | [543..2378] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MDDPNQCTIK QEDSITRPRP TEAPTIQNLK QEPAIEEGSS STMDNMLMLT IDTNQANWQG 60
61 TYDDDEMDLN NKTDLIPLLE T
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-193] |
1 11 21 31 41 51
| | | | | |
1 EKTTINEDEL YDDEEDDDDD EEIKKGIGFE LLAQALGMSA KVPVEKEEPE KERAKLSGVG 60
61 EFMKQIRGEI KPIQKERIVL DELGFRVRDP SKFPPCRIAE VQQTLTLADH QD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [194-304] |
1 11 21 31 41 51
| | | | | |
1 GIDLPPPNAP TDVRIVRKLI RQKMVRCKKC KNRFIEKNIY ERHLRDKHPD LYEEYIREQE 60
61 EEVELQRLEE IEANRIEELQ TGGFIPPENE ISQPSEDPNY IPLPGENNGG L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [305-543] |
1 11 21 31 41 51
| | | | | |
1 VPRFDYYGRI KQLKRPYKKK VSPQCPFCDK RFRNEFSLKK HFAKKHEEMV EFQQCLKCFK 60
61 CVENDAEMAN HDCELTYVCF ECTPIRNLCT DNRLLNHRKK FHRGANSGFR CSFCNMKFLT 120
121 PRKLRKHKKM SHVFTKTFQC HFCEEIFISE VAVMTHERMH TGIIKFECKV CDFRANRYTA 180
181 MEEHKRDEHG YVCAICHERH AEYPEMKHHV YEEHGGYLAA DEPTAYVETP RMWILYKGE
|
| Detection Method: | |
| Confidence: | 53.09691 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
