| Protein: | aat-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 493 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aat-3.
| Description | E-value | Query Range |
Subject Range |
|
|
304.0 | [0..18] | [410..963] |
|
Region A: Residues: [1-410] |
1 11 21 31 41 51
| | | | | |
1 MGKQEQSEPL NQEPSNEHHD EEVGDKGLEK TMTLFNGVSI IVGCIIGSGI FISPTGIQAQ 60
61 AGSVGLSLIV WVLSGLFAGI GAFCYAELGT LIRKSGGDYA YIMEAFGPFL AFLRLWIESI 120
121 VVRPCTATIV ALTFAIYMLK PFYPDCDSPP LSTELIAALL LVLLTAVNCI SVKWASKVQD 180
181 FFFVTKTAAL VLIIFTGLWN MVSGKPEAFD SFENIFENTA KDLETASLAF YSGLFAYQGW 240
241 NYLNFIVEEL QNPKRNLPLS IAISCSLCTI IYTLTNVALY TSITPDEMLA SPAVAVLFAE 300
301 KNYGWFAFCM PIFVACSTIG SANGVILTSS RLFYCGAREG QMPNVLTMVN KTTKTPIPAV 360
361 ILTGLLSLLY LLLSNNIYSL INYIQVSYWI AIGGAILALF YFRKTMPDAP
|
| Detection Method: |  |
| Confidence: | 1.34 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-493] |
1 11 21 31 41 51
| | | | | |
1 RAVKAPIVFP IIFFIGCVLL VLVPVLGNPK DTAIGILIML SGVPVYLIFI AWKGKPKCID 60
61 SLTDSVTIFT QKLFMVVDAN KEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
