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View Structure Prediction Details

Protein: acs-16
Organism: Caenorhabditis elegans
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-16.

Description E-value Query
Range
Subject
Range
gi|78044614, gi|... - gi|78044614|ref|YP_359514.1| acetyl-CoA synthetase [Carboxydothermus hydrogenoformans Z-2901], gi|77...
541.0 [0..2] [569..46]

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Predicted Domain #1
Region A:
Residues: [1-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFFQQTFC IDYNGWVTGV SKAPPPKQID FDSQTIPQLI YTKSEMDRVA AVFDSEKLSL  60
   61 TFSKIVSEME SLAAGFLSIG LKQGDRVLVA GSNHSQVMLC ALACSRAGLV FSLANPNYPN 120
  121 SYSLKRALEL GEFQCIVCFR AHQYEADHLN NLLLEIAPEL MRSRKGQLKS ELLPKLTHVI 180
  181 LAEEDHKHAG TFTLSEVFLK SSKEKIAKLP DFSKWSSHKL ACLQFTLGTT GAPKLIALSH 240
  241 YQMLNGARAV AAAFGINDKH VLACALPIFR IAIFNLICLS PFLTECRIIF PDATPLPKNL 300
  301 FSSVSKYRCT TLLSNGAALR LLLKISQTQR VKLSALENIL LIGDRVSKEV LKLIKVQAEN 360
  361 VKIIAVGYLL TETGSIPLMG DQNSDFTRNV GKAIAGYEAH LIPLDGSENQ VETGKLGKLL 420
  421 IRVYYGSTFM GYAPDTKGKE KWVDTGDIGR MDENGAIEVV ASEDDLIYDK NNCLVEHWNL 480
  481 ERLLNQNDLI KGVQVVSRGR GQPVTAVCVA RSTQFHAAKL KDELKSMCRS HHFVAPDVFA 540
  541 FVDDFPRVHT KIQKFRIRAM LESGQISVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 145.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle