| Protein: | haf-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for haf-4.
| Description | E-value | Query Range |
Subject Range |
|
|
631.0 | [0..1] | [787..1] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MNSTVASRFS WGLILASIDF LACLLFACLH DGTFKFANFT SQFGDFSFFT STIDLFLLQF 60
61 FRFALWMVPA AIHVANKADT LTMWKEPIFC SALLICAASP TKLLLLTEKL KPDEFLTFGD 120
121 TAFLVWNFIS AIILNSSWTR YFSRTPSSYI IL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [153-723] |
1 11 21 31 41 51
| | | | | |
1 EDEDLEVAPK QTFELIFRLL QYCKREWLWH ISGFSWLFIY SITRIFVPYY TGQVIATVVA 60
61 TKSYPALSNA VYIMTIISLV SAVAAGFRGG SFEYAYARIQ RAIRYDLFHG LVKQDVAFYD 120
121 AHKTGEVTSR LAADCQTMSD TVALNVNVFL RNCVMLLGSM IFMMKLSWRL SLVTFILVPI 180
181 IFVASKIFGT YYDLLSERTQ DTIAESNDVA EEVLSTMRTV RSFSCENVEA DRFYGKLTHT 240
241 LDVTRTKAIA YIGFLWVSEL FQSFIIVSVL WYGGHLVLTQ KMKGDLLVSF LLYQMQLGDN 300
301 LRQMGEVWTG LMQSVGASRK VFEYIDREPQ IQHNGEYMPE NVVGKIEFRN VHFSYPTRSD 360
361 QPILKDLSFT VEPGETVALV GPSGSGKSSC ISLLENFYVP NAGQVLVDGV PLEEFEHHYI 420
421 HKKIALVGQE PVLFARSVME NVRYGVEVAD TEIIRSCEMA NAHGFIMQTT LKYETNVGEK 480
481 GTQMSGGQKQ RIAIARALVR EPAILLLDEA TSALDTESEH LVQEAIYKNL DGKSVILIAH 540
541 RLSTVEKADK IVVINKGRVE QIGNHETLLK D
|
| Detection Method: | |
| Confidence: | 148.0 |
| Match: | 2hydA |
| Description: | No description for 2hydA was found. |
|
Region A: Residues: [724-787] |
1 11 21 31 41 51
| | | | | |
1 TNGTYAKLVQ RQMMGDQKPR KRPAVARSGP QPAASINVAG PSQGNAMSLL STSFSQSASS 60
61 VTSH
|
| Detection Method: | |
| Confidence: | 56.69897 |
| Match: | 1v43A |
| Description: | Crystal Structure of ATPase subunit of ABC Sugar Transporter |
Matching Structure (courtesy of the PDB): |
|
