| Protein: | lec-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lec-11.
| Description | E-value | Query Range |
Subject Range |
|
|
226.0 | [0..4] | [228..9] |
|
|
225.0 | [0..4] | [227..9] |
|
|
224.0 | [0..5] | [227..10] |
|
|
224.0 | [0..4] | [228..9] |
|
|
220.0 | [0..4] | [226..9] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MVHVIENPPI PLTTPIYEGM REHSSVEIHG EVFQGPQGGF TVEFPTKNGV ALHISVRMGS 60
61 YGQNVIVFNH LQRGRWHREE HHQNTIMFGR PFCMRIHNEH RKYSIHVDGH HIGHYHHHKC 120
121 PKRIVAMTVR GDLRVGKIHF E
|
| Detection Method: |  |
| Confidence: | 42.39794 |
| Match: | 2eakA |
| Description: | No description for 2eakA was found. |
|
Region A: Residues: [142-232] |
1 11 21 31 41 51
| | | | | |
1 NFKHHNGGGT EIGVMQMPVA PTPIVVAQPP PPMIVPQPQI VPVVQQIMQP MVQPIYPSVQ 60
61 PIVYPTATPI IYTQPEVIYM DGYHHHRHHH Y
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.446 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.338 | a.7.14 | Description not found. |
