| Protein: | sup-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sup-9.
| Description | E-value | Query Range |
Subject Range |
|
|
206.0 | [0..4] | [326..100] |
|
Region A: Residues: [1-329] |
1 11 21 31 41 51
| | | | | |
1 MKRQNIRTLS LIVCTLTYLL VGAAVFDALE TENEILQRKL VQRVREKLKT KYNMSNADYE 60
61 ILEATIVKSV PHKAGYQWKF SGAFYFATTV ITTIGYGHST PMTDAGKVFC MLYALAGIPL 120
121 GLIMFQSIGE RMNTFAAKLL RFIRRAAGKQ PIVTSSDLII FCTGWGGLLI FGGAFMFSSY 180
181 ENWTYFDAVY YCFVTLTTIG FGDYVALQKR GSLQTQPEYV FFSLVFILFG LTVISAAMNL 240
241 LVLRFLTMNT EDERRDEQEA ILAAQGLVRV GDPTADDDFG RLPLSDNVSL ASCSCYQLPD 300
301 EKLRHRHRKH TEPHGGPPTF SGMTTRPKY
|
| Detection Method: |  |
| Confidence: | 29.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
