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View Structure Prediction Details

Protein: unc-9
Organism: Caenorhabditis elegans
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-9.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
432.0 [0..3] [378..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLLYYFAS AVKSIQFHVD DDIIDKLNYY YTTAIITVFA ILVSAKQYVG FPIQCWVPAT  60
   61 FTEPMEQYTE NYCWVQNTYF LPLHDYIPHN YAERENRQIG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQWVPFVLA LEALLFYVPT IVWRLLSWQS GIHVQSLVQM ACDSRLLDLE SRNRALQTIA  60
   61 TNVEEALHVK HQVMSGNRLK LLNLIICTRS SGAAVTFLYI SVKILYTVNI VGQIFLLNTF 120
  121 LGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [224-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSKWYGLQVL NDLMNGREWE ESGHFPRVTL CDFEVKVLGN VHRHTVQCVL MINMFNEKIF  60
   61 LFLWFWYFLL AGATLCSLFY WIYISVVPSR QLNFVGKYLT GIEGYKMVDS QSLRRFVFHF 120
  121 LRQDGVFLLR MVATHAGELP CYELAKTLWN NYCDNKEGKM HDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle