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View Structure Prediction Details

Protein: CE28225
Organism: Caenorhabditis elegans
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28225.

Description E-value Query
Range
Subject
Range
gi|38036062 - gi|38036062|gb|AAR08414.1| metal transport protein [Medicago truncatula]
179.0 [0..2] [320..59]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTATVLQYI LAFAMFVVTA AIGIVPLFIV RVMKRSQNES EQGYLSYLTC FAGGVFLATC  60
   61 FLDIIPHINE GYEELMETYD LNWHFAYPQF VTCCGFFFIY FIEEFTTFVF GNGQQPGHGH 120
  121 SHSLNKGNKI TTTSDGRLSP GMPKERK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [148-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSVNITNLRM EEASTWVVSD EKSNILKSLT FAVAMSFHSL LEGFALGVQD SKGRIYALFF  60
   61 SLLLHKGVEA FSVGLQISMA NSNKVKTVLA TILIYSLMAP LGSIMGSILQ NSETNIYKDC 120
  121 AILLLESLAA GTFIYVTFIE IMASEKSNDF NHLKQLLWII IGFALVTTMQ VFFGHEHGGE 180
  181 HAHGGAEGNG TEHGHQHHHH GR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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