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View Structure Prediction Details

Protein: CE28171
Organism: Caenorhabditis elegans
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28171.

Description E-value Query
Range
Subject
Range
gi|25375356 - gi|25375356|pir||B88197 protein ZK1127.3 [imported] - Caenorhabditis elegans
282.0 [0..1] [192..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLTKKTEE EIRRDFFGPV QEAACKPYLL DVDPRKSWCE LSELRLSTLI CEFKPIGINK  60
   61 HFHLIGIIER MGKVFDNENA QVEIFLSEEN RVAFRNQQRD LLMGGRPERT SYPPKYLCRP 120
  121 SLEMIEDKLK KWFGLRFCEE NESYPSEFNS VTDYELPEYI MAEVRELSDK RAERERNTDN 180
  181 GIVESEKKST IPRRLTEEDE NYDIQT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.356547
Match: PF07904.4
Description: No description for PF07904.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle