| Protein: | glc-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 484 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glc-3.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..16] | [480..93] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MSLRSLLNIL LIVAFWIVGG NCDASSDTEI IKKLLGKGYD WRVRPPGINL TIPGTHGAVI 60
61 VYVNMLIRSI SKIDDVNMEY SVQLTFREEW VDGRLAYGFP GDSTPDFLIL TAGQQIWMPD 120
121 SFFQNEKQAH KHDIDKPNVL IRIHRDGRIL YSVRISMVLS CPMHLQYYPM DVQTCLIDLA 180
181 SYAYTENDIE YRWKKTDPVQ LKKGLHSSLP SFELNNVDTT LCTSKTNTGT YSCLRTVLEL 240
241 RRQFSYYLLQ LYIPSTMLVI VSWVSFWLDR GAVPARVTLG VTTLLTMTTQ ASGINAKLPP 300
301 VSYTKAIDVW IGACLTFIFG ALLEFAWVTY ISSRSFYKRN K
|
| Detection Method: |  |
| Confidence: | 65.522879 |
| Match: | 2bg9E |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-484] |
1 11 21 31 41 51
| | | | | |
1 NCSSRNSLLI ETKQALIIPN TVVAQFPEHP EEVEMGLAQA PDVWIRQSGN GKTVSRVNGH 60
61 INHNNDEAAE LIIFDAKHKN RRFVWWTNFR NIRLIRWIRN RLNVDDNAKR ADLISRVLFP 120
121 TLFVCFNFVY WTKYSQYHAP EAK
|
| Detection Method: | |
| Confidence: | 35.09691 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
