| Protein: | acr-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 538 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-7.
| Description | E-value | Query Range |
Subject Range |
|
|
430.0 | [0..6] | [537..1] |
|
Region A: Residues: [1-345] |
1 11 21 31 41 51
| | | | | |
1 MMVQSIQIVL PVALFFLIVF NGFTVEGSKK EAQLYRDLLT NYSYLVRPVR NPKKALTVTM 60
61 KVFIQQVLLV DAKHQMIEVN AWLKYIWTDF RLRWNPLDYE NITSVRFQGE DQIWQPDILL 120
121 YNRYIEDEQE SFDITYKTNA VAYSDGVINW IPPGIFKLSC KMDITLFPFD EQICFMKFGS 180
181 WTYHGFALDL RLDVVKGQEP SADLSTYITN GEWHLLSAPA RREEKFYKCC KEPYPTVKFY 240
241 LHLRRRTFYY VFNVVLPTLL VSFMSLLAFC LPATDLSEKI GLQTTILLSV CFFLTILSEM 300
301 TPTTSEAVPL LGVFFSALTF IVAMSTTFTI LVLNIRYRQI TNHYL
|
| Detection Method: |  |
| Confidence: | 76.045757 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [346-538] |
1 11 21 31 41 51
| | | | | |
1 SPMFRSIFLE CLPWLMMMKR PDHKFRRGSS YRDSSADQCV QCAKNAELKS ILRGTDNQQQ 60
61 IETNTFYPFP TETLSLNRKV GDGLFIQRRC QIHEEARSEK FTHGMLACEK SLRENGSELA 120
121 NILVTILKMY EVMVSQVERI RKRIALKRKR KDIQDEWKFA AQAVDRFCLI IFTIVFIICC 180
181 FIFVAIPPIK ILD
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1oedE |
| Description: | Acetylcholine receptor protein, gamma chain |
Matching Structure (courtesy of the PDB): |
|
